U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX1997438: GSM2258457: 507656T3CF Rep 3; Glycine soja; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 26.7M spots, 3.3G bases, 1.3Gb downloads

Submitted by: NCBI (GEO)
Study: RNA-Seq Study Reveals Genetic Responses of Diverse Wild Soybean Accessions to Increased Ozone Levels
show Abstracthide Abstract
Analysis of gene expression data from four genetically diverse wild soybean accessions helps reveal both sensitive and resistant responses of the plants to increased ozone levels. Results help characterize genetic response of wild soybean to ozone stress and could help provide information on genetic resources for creating ozone-tolerant soybean breeding lines. Overall design: 2 sensitive genotypes (PI 407179 and PI 424007) and 2 resistant genotypes (PI 424123 and PI 507656) were replicated in 4 complete block designs and subjected to either 75 parts per billion (ppb) ozone or a control of charcoal-filtered conditions (< 10 ppb ozone). Total RNA was isolated from the first three trifoliate of each plant and deep sequenced using Illumina HiSeq 2500.
Sample: 507656T3CF Rep 3
SAMN05509180 • SRS1598895 • All experiments • All runs
Organism: Glycine soja
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: Total RNA was isolated using Qiagen Plant RNeasy Mini Kit (Cat No./ID: 74904) with on-column DNase I digest. Standard Illumina Protocol.
Experiment attributes:
GEO Accession: GSM2258457
Links:
Runs: 1 run, 26.7M spots, 3.3G bases, 1.3Gb
Run# of Spots# of BasesSizePublished
SRR399656626,741,6373.3G1.3Gb2017-07-21

ID:
2873354

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...